Overcome aging. Part II.
Children of the Dungeon
Habitat: East Africa
- (southern Ethiopia, Kenya, Somalia).Maximum life expectancy: more than 32 years with a body length of 8-10 cm (a mouse or rat rarely overcomes the four-year milestone).
- Social structure: colonial eusocial animals.
- The Naked and Damar navvies are the only known eusocial vertebrates: with castes (open, age–dependent), inter-caste division of labor and access to reproduction, collective care for offspring. The colony usually consists of several dozen working individuals, but only the main female, the queen, reproduces with the help of 1-3 favorites. Working individuals do not show gender differences.Housing conditions: a system of passages lying at a depth of up to two meters connecting nest chambers, "canteens" and "public toilets" (Fig. 3). With an average diameter of 4 cm, the total length of the colony tunnels can reach several kilometers.
- Food: vegetarian (fig. 3).
- They do not need water, juicy bulbs and tubers are preferred from underground parts of plants: a one-and-a-half meter in diameter tuber of a pyrenacanthus shrub can solve the food issue for the entire colony for several months. In captivity, they agree to consume fruits and vegetables. They do not neglect their own feces (intestinal microflora, obviously, plays an important role in maintaining their remarkable health).Signs: The most "bald" of land animals; have weak black-and-white vision; communicate using a wide range of audio signals; dig tunnels with their teeth.
- Special signs (which other long-lived rodents do not have): They are not able to maintain a constant body temperature – they are the only ones among mammals (apparently due to changes in the thermogenin protein and the shutdown of melatonin receptors - the regulator of circadian rhythms and body temperature).
- They do not feel pain during chemical injuries of the skin. Due to the mutation of the TAC1 gene, the C-fibers (thin axons) of the skin, eyes and nose of the digger do not produce the substance P - neuropeptide, which transmits impulses from receptors to the brain. Mutations of the genes of the neuropeptide CGRP and the channel protein of neurons Na(V)1.7 can also contribute to insensitivity. Compensation for the TAC1 mutation restores the ability to feel the burning sensation from capsaicin [4, 5]. They have β-actin resistant to oxidation and practice special processing of 28S rRNA [6].Signs that are especially valuable for gerontological research: they do not suffer from cancer, dementia and the consequences of atherosclerosis, they easily cope with hypoxia and oxidative stress, and ... they almost do not age.
- Their mortality does not increase with age, the ability to reproduce does not decrease [7], age-related changes in biochemistry and physiology are minimal: only closer to the age of 30, muscle and fat mass decreases, lipofuscin is deposited in tissues and local infarcts occur (histological findings that do not manifest clinically), the retina suffers and cataracts begin to develop (which the animal hardly notices). If Homo sapiens were aging equivalent to a digger, then the biological age of an 80-year-old person would not exceed 30 years.Recognition in the scientific community: "Vertebrate of the Year – 2013" according to the journal Science; the study of a naked digger is one of the 25 scientific ideas for life extension of the Science for Life Extension Research Support Foundation [8].
- Figure 3. The lifestyle of a naked digger (a system of underground tunnels and chambers).
At the origins of exclusivity: the genome of the naked diggerMobile genetic elements make up only 25% of the digger genome (in rats – 35%, in humans – 40%).
- Among the genes that have lost relevance for the digger and have strongly mutated (pseudogenes), those associated with vision, smell, spermatogenesis and protein ubiquitination predominate.
- The latter process prepares molecules that are unnecessary for some reason for destruction by proteasomes - it gives them a "one–way ticket" [11]. This genetic feature of the digger is also confirmed in studies of its metabolism: the need for ubiquitination in the animal is reduced.Among the genes exposed to positive selection in the digger compared to rats and mice, TEP1 (the gene of telomerase-associated protein 1 regulating telomerase activity) and TERF1 (the gene of telomeric repeat binding factor 1 preventing telomere superstructure) were found to be involved in the regulation of telomere length and, consequently, in the replicative aging of cells [12, 13].
- (It should be noted here that the TERT reverse transcriptase gene – the catalytic telomerase subunit that completes telomeres – is expressed in the naked digger at any age, although the telomeres themselves are relatively short and telomerase activity is low.) In a later and large–scale study of transcriptomes of different African diggers, changes in the TERF1 gene were not considered specific to them, although they emphasized the possible significance for the longevity of diggers of changes in other genes related to telomerase and chromosome stability, as well as receptor genes involved in the secretion of growth hormone and control of metabolism - GHRHR and GHSR. Adaptations of the BRCA1 tumor suppressor gene and other components of the BRCA network may be equally significant [14].The digger has stable expression of most genes during his life, which change activity in humans and "ordinary" rodents over the years.
- In particular, the activity of genes associated with the degradation of macromolecules does not increase in the digger: GSTA1 (the gene of glutathione-S-transferase α1, metabolizing bilirubin, carcinogens, products of oxidative stress), DERL1 (the gene of derlin-1, one of the participants of the pathway associated with the endoplasmic reticulum for the destruction of defective proteins) and GNS (the gene N-acetylglucosamine-6-sulfatase, which provides lysosomal degradation of heparan sulfate, a component of the extracellular matrix). The activity of the NDUFB11, ATP5G3 and UQCRQ genes encoding mitochondrial proteins does not decrease in the digger, which confirms the data on the lifelong stable operation of its "energy factories".Some genes in the brain of Heterocephalus glaber work even more intensively over the years, while their human homologues, on the contrary, are lazy.
- This applies, for example, to the CYP46A1 and SMAD3 genes. The product of the first of them – neural cholesterol-24-hydroxylase – ensures the removal of excess cholesterol from the brain, which prevents the aggregation of β-amyloid and the progression of Alzheimer's disease [15]. The SMAD3 protein is a transcription modulator in the TGF–β signaling pathway that slows down cell division (including cancer cells).In 2014, an improved version of the reading of the Heterocephalus glaber genome was released, the analysis of which revealed unique adaptations of the digger DNA in the sites encoding the tumor suppressor p53 and the hyaluronan receptors CD44 and HMMR (RHAMM) [16].
- Structural features and powerful constitutive synthesis of globins allow diggers to supply oxygen to the brain more efficiently. A lifetime high level of neuregulin-1 growth factor and differentiation of neurons (NRG-1) in the brain of long-lived diggers (including the "non–African" blind man) can make a decisive contribution to maintaining synaptic plasticity and stable functioning of the nervous system - an indispensable condition for active longevity. It has been shown that neuronal signaling saves neurons from the "tyranny" of neurotoxins – external and internal (for example, with the accumulation of amyloids). It is also assumed that the NRG1 factor is able to reduce anxiety, "interfere" in social life and even perform the function of a tumor suppressor. Hypoxia serves as an indirect inducer of NRG1 synthesis. In rodents, the level of neuregulin-1 synthesis in the cerebellum directly correlates with the maximum life expectancy (MPJ), and in humans, violations of NRG1 signaling accompany schizophrenia, multiple sclerosis and Alheimer's disease [17].The low biological activity of insulin (due to radical changes in the β-chain) and the utilization of glucose by an alternative route (possibly through the insulin-like growth factor IGF2, which usually works before birth) can contribute to longevity.
- In a naked digger, the level of glycated hemoglobin is stable during life, diabetes does not occur. This rodent is also characterized by weak thyroid signaling, which is not surprising: triiodothyronine raises blood glucose levels, accelerates metabolism, increases body temperature and tissue oxygen demand. For diggers living in conditions of disgusting gas and heat exchange, the picture is reversed. It is believed that the low activity of this hormone can prolong life by reducing body temperature, the intensity of basal metabolism, membrane permeability and the activity of certain signaling pathways.Inactivation of the FASTK gene may partially protect against cancer, inflammation and cellular aging.
- The product of the gene is a kinase, a sensor of mitochondrial stress. Its excess (in tumor cells and in chronic inflammation) delays Fas-mediated apoptosis. Its absence reduces the oncogenic potential, promotes the growth and recovery of neurons (in humans, these processes slow down with age).Intensive production of reactive oxygen species (ROS) and regular oxidative stress do not prevent diggers from living for a long time.
- And this is despite the weak gene expression of some peroxyredoxins and the low activity of glutathione peroxidase 1 – standard antioxidant enzymes. To partially explain this phenomenon for a naked (but not Damar) digger, the replacement of oxidized amino acid residues in its β-actin with non-oxidizable ones. In this case, actin is not depolymerized, regulatory processes do not change. But a high level of ROS and oxidized actin is a typical finding in elderly people and people suffering from neurodegenerative diseases. Nevertheless, in the naked digger, the overall high level of oxidative damage to proteins, some lipids and DNA does not disrupt their functions and does not increase with age (unlike mice) [18]. Interestingly, similar data – contradicting the free radical theory of aging – were obtained in experiments with yeast: calorie restriction prolonged their life, although at the same time cellular respiration increased, and ROS was produced more [19, 20]. Apparently, in order to prolong life, it is more important not to avoid oxidative stress, but to develop mechanisms that dampen its effects or activate ways to protect against other damage. Probably, active autophagy (which means maintaining a high–quality pool of mitochondria and amino acid homeostasis) and structural stability of proteins are among them. It is assumed that the central role in the regulation of the entire complex of protective mechanisms in long-lived species may be played by the constant activity of the Nrf2 signaling pathway (Fig. 4), intersecting with the p53 and NF-kB systems [21, 22]. This is confirmed by the consistently high Nrf2 signaling in the tissues of all long-lived rodents, and life expectancy correlates not with the overall level of this protein, but with its signaling activity. The latter is regulated by the protein "Judas" Keap1 and βTrCP (Fig. 4) – it is with their levels that the MPJ of rodents inversely correlates [22].The unique processing of the naked digger's 28S rRNA probably contributes to the high translation accuracy and amazing stability of the proteome.
- It turned out that at a similar rate of translation, the number of mistakenly included amino acids in the fibroblasts of the naked digger is four times lower than in mice. It is possible that a special, two-fragment, 28S rRNA changes the folding or dynamics of the large ribosome subunit, thereby increasing the accuracy of translation and reducing the number of abnormal proteins. The proteome of this rodent is characterized by: the resistance of proteins to denaturation, a lifetime low level of their ubiquitination and the increasing activity of proteasomes over the years (in mice, on the contrary, the proportion of "condemned to death" proteins is growing, and the "executioners"-proteasomes cope with the load worse). It turns out that high-precision synthesis and effective chaperone systems form a "healthy" proteome that protects the cell from the accumulation of aggregates and other age-dependent effects. And apparently, active proteasomes cope well with damaged proteins [23]. But what is most interesting is that the transcription of proteasome genes and chaperones is regulated by the same Nrf2.Figure 4. Cytoprotective signaling pathway Nrf2 (nuclear factor-erythroid 2-related factor-2).
1. Such a different heparanase
2. Macroglobulin cleaning management
3. Hyaluronic expansion
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